Input parameters:

  Query = ENSMUSP00000114734 (Len=236)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000114734, Len=236):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XRGRRPSGVAARVRVGRGGRSWIPPDYGCRSWLVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEV 80  
WD40-rpts                                                                                      

Query       81 TKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 160 
WD40-rpts                                                                                      

Query      161 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 236 
WD40-rpts                          (________________________WD 1_______________________)   

1 WD40-repeats found in QUERY=ENSMUSP00000114734 (Len=236):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   181-233      4.15  286.16  0.00863       27.5%     46.11

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  181-233    YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWD

   WD40 Template    TGECLR------------TLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD