Input parameters:

  Query = ENSMUSP00000114421 (Len=135)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000114421, Len=135):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWS 80  
WD40-rpts      (_______________WD 1_______________)     (_________________WD 2________________)

Query       81 QKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSK 135 
WD40-rpts           (_________________WD 3________________)           

3 WD40-repeats found in QUERY=ENSMUSP00000114421 (Len=135):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-36       7.07  406.58  0.00021        5.0%     44.11
  WD 2:  Seg  5    42-80       8.80  478.00  2.2e-05       22.5%     52.03
  WD 3:  Seg  9    86-124      7.51  424.70  0.00012       20.0%     56.78

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-36     ---MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK
   WD 2   42-80     WTKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWS
   WD 3   86-124    WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCY

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD