Input parameters:

  Query = ENSMUSP00000114400 (Len=119)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000114400, Len=119):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 XQHDFSSQIFSLGHCPNQDWLAVGMESSHVEVLHVRKPEKYQLRLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGA 80  
WD40-rpts      (______________WD 1______________)(__________________WD 2_________________)(____

Query       81 SIFQSKESSSVLSCDISRNNKYIVTGSGDKKATVYEVVY 119 
WD40-rpts      ______________WD 3_________________)   

3 WD40-repeats found in QUERY=ENSMUSP00000114400 (Len=119):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-34       6.76  394.10  0.00030       17.5%     43.99
  WD 2:  Seg  4    35-75       8.63  471.00  2.8e-05       27.5%     55.63
  WD 3:  Seg  8    76-116      8.29  457.07  4.3e-05       30.0%     55.64

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-34     -------XQHDFSSQIFSLGHCPNQDWLAVGMESSHVEVLH
   WD 2   35-75     VRKPEKYQLRLHESCVLSLKFASCGRWFVSTGKDNLLNAWR
   WD 3   76-116    TPYGASIFQSKESSSVLSCDISRNNKYIVTGSGDKKATVYE

   WD40 Template    TGE-CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD