Input parameters:

  Query = ENSMUSP00000113614 (Len=504)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000113614, Len=504):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPVLHMPTSKENLKEKGPQNATDSYPHK 80  
WD40-rpts                                                                                      

Query       81 QYPANQGQDVEYLVTGVALTADTKIQRMPSESAAQSLAVALPSQTRVDANRTGPAGSEYRHPGASDRSQPTAMNSIMETG 160 
WD40-rpts                          (_________________WD 1________________)   (_________________

Query      161 NTKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVR 240 
WD40-rpts      WD 2________________)  (_________________WD 3________________)   (______________

Query      241 GVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHT 320 
WD40-rpts      ___WD 4________________)   (_________________WD 5________________)   (__________

Query      321 NAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDNIKQWKFPDGGFIQNLS 400 
WD40-rpts      _______WD 6________________)   (________________WD 7________________)   (_______

Query      401 GHNAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR 480 
WD40-rpts      _________WD 8________________)           (_________________WD 9________________)

Query      481 EDETATEETHPVSWKPEIIKRKRF 504 
WD40-rpts                              

9 WD40-repeats found in QUERY=ENSMUSP00000113614 (Len=504):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   101-139      6.61  387.54  0.00037       10.0%     35.57
  WD 2:  Seg  5   143-181      7.30  416.31  0.00015        7.5%     30.15
  WD 3:  Seg  7   184-222      9.28  497.91  1.2e-05       37.5%     54.57
  WD 4:  Seg 11   226-264      9.58  510.37  8.2e-06       37.5%     56.17
  WD 5:  Seg 15   268-306      9.51  507.55  9.0e-06       32.5%     55.78
  WD 6:  Seg 19   310-348     10.06  530.16  4.4e-06       37.5%     54.42
  WD 7:  Seg 23   352-389      7.88  440.09  7.3e-05       35.0%     51.82
  WD 8:  Seg 27   393-430      8.72  474.79  2.5e-05       37.5%     53.73
  WD 9:  Seg 32   442-480      7.91  441.20  7.0e-05       25.0%     38.57

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  101-139    ADTKIQRMPSESAAQSLAVALPSQTRVDANRTGPAGSEY
   WD 2  143-181    GASDRSQPTAMNSIMETGNTKNSALMAKKAPTMPKPQWH
   WD 3  184-222    WKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWD
   WD 4  226-264    GKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWD
   WD 5  268-306    NKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWD
   WD 6  310-348    KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD
   WD 7  352-389    GKTRVTLTNHKKSVRAVVLHPLLYTFASGSPD-NIKQWK
   WD 8  393-430    GGFIQNLSGHNAIINTLAVNADG-VLVSGADNGTMHLWD
   WD 9  442-480    AAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD