Input parameters:

  Query = ENSMUSP00000113597 (Len=432)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000113597, Len=432):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEIHLPRLPLMEIFSYLDAYSLLQVAQVNKNWNELASSDVLWRKLCQKRWFYCNMVTQQLLGKETWKEFFIYRTWQEHAK 80  
WD40-rpts                                                                                      

Query       81 SRAKPEDFIYKEIPAEYGIQAYACYISEHGLTRNGQGRSVICMATSMNRISTWDIHEGVLTWVSPEQPASIKLLTTLPEM 160 
WD40-rpts                  (__________________WD 1__________________)   (_________________WD 2_

Query      161 YIAVTVDMESTIKLWDCHNSEALATNSLISPCQSLKAVITKDGPIVLIGDTLGNLNIFRIPDLYHITRLKVFPYGISELY 240 
WD40-rpts      _______________)   (_________________WD 3_________________)   (_________________

Query      241 CSPQKKWIFLNRKHPHILPKVFYMSSLLRTSEFSAPVSTDLKFSLCQRAFWTPRREDRITLMSIHGPKKIKKFITFDMEL 320 
WD40-rpts      WD 4________________)   (_________________WD 5________________)                 

Query      321 EKIGNKITVKEHFFASFSLQNYEERPEWYGVSDKDVIVCSTRFSLLLFDINGHCLQAFQYCPEQILRLWVDPLHVIVSCN 400 
WD40-rpts                (_________________WD 6________________)  (_________________WD 7_______

Query      401 DGFLDVYAWEERSQQLNKCYRLQYSKHLPSSG 432 
WD40-rpts      _________)                      

7 WD40-repeats found in QUERY=ENSMUSP00000113597 (Len=432):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    93-134      3.15  244.60  0.03102       10.0%     18.16
  WD 2:  Seg  7   138-176      8.44  463.14  3.6e-05       20.0%     54.21
  WD 3:  Seg 11   180-219      6.75  393.56  0.00031       20.0%     53.09
  WD 4:  Seg 15   223-261      7.42  421.28  0.00013       15.0%     52.29
  WD 5:  Seg 19   265-303      4.40  296.41  0.00629       17.5%     29.78
  WD 6:  Seg 25   331-369      5.97  361.42  0.00084       10.0%     38.39
  WD 7:  Seg 29   372-410      7.06  406.27  0.00021       12.5%     37.54

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   93-134    IPAEYGIQAYA-CYISEHGLTRNGQGRSVICMATSMNRISTWD
   WD 2  138-176    GVLTWVSPEQP-ASIKLLTTLPEM---YIAVTVDMESTIKLWD
   WD 3  180-219    SEALATNSLISPCQSLKAVITKDG---PIVLIGDTLGNLNIFR
   WD 4  223-261    LYHITRLKVFP-YGISELYCSPQK---KWIFLNRKHPHILPKV
   WD 5  265-303    SSLLRTSEFSA-PVSTDLKFSLCQ---RAFWTPRREDRITLMS
   WD 6  331-369    EHFFASFSLQN-YEERPEWYGVSD---KDVIVCSTRFSLLLFD
   WD 7  372-410    GHCLQAFQYCP-EQILRLWVDPLH---VIVSCNDGFLDVYAWE

   WD40 Template    GECLRTLSGHT-SGVTSVSFSPDG---KRLVSGSEDGTIKVWD