Input parameters:

  Query = ENSMUSP00000113420 (Len=96)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000113420, Len=96):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKVITCEIAWHNKEPVYSLDFQHGATWKIHRLASAGVDTAVRIWKLERGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEI 80  
WD40-rpts       (___________________WD 1___________________)   (____________________WD 2_______

Query       81 LASGGDDAVILLWKMN 96  
WD40-rpts      _____________)  

2 WD40-repeats found in QUERY=ENSMUSP00000113420 (Len=96):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-45       7.01  404.23  0.00022       20.0%     53.99
  WD 2:  Seg  4    49-94       9.18  493.79  1.4e-05       40.0%     43.17

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-45     KVITCE-------IAWHNKEPVYSLDFQHGATWKIHRLASAGVDTAVRIWK
   WD 2   49-94     -GPDGKAIVEFLSNLARHTKAVNVVRFSPTGE----ILASGGDDAVILLWK

   WD40 Template    TGECLR-------TLSGHTSGVTSVSFSPDGK----RLVSGSEDGTIKVWD