Input parameters:

  Query = ENSMUSP00000112896 (Len=593)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000112896, Len=593):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAYKMSQSISVTLGKDIPSRLRCLPQRPLFSLCQSDRLLIKGGKIVNDDQSFHADLYVEDGLIKQIGENLIVPGGIKTID 80  
WD40-rpts                                                                                      

Query       81 AHGLMVLPGGVDVHTRLQMPVMGMTPADDFCQGTKAALAGGTTMILDHVFPDAGVSLLAAYEQWRERADSAACCDYSLHV 160 
WD40-rpts                                                                                      

Query      161 DIPRWHESTKEELEALVRDKGVNSFLVFMAYKDRCQCTDGQIYEIFSLIRDLGAVAQVHAENGDIVEEEQKRLLEQGITG 240 
WD40-rpts                                                                                      

Query      241 PEGHVLSHPEEVEAEAVYRAVTIAKQANCPLYVTKVMSKGAADMVAQAKRRGVVVFGEPITASLGTDGSHYWSKNWAKAA 320 
WD40-rpts                                                                                      

Query      321 AFVTSPPINPDPTTADHLTSLLSSGDLQVTGSAHCTFTTAQKAVGKDNFTLIPEGVNGIEERMSVVWEKCVASGKMDENE 400 
WD40-rpts                             (___________________________________________WD 1_________

Query      401 FVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWNPRATKVISAKSHNLNVEYNIFEGVECRGVPTVVISQGRVVLEDGNL 480 
WD40-rpts      _________________________________)                                              

Query      481 LVTPGAGRFIPRKTFPDFVYKRIKARNRLAEIHGVPRGLYDGPVHEVMLPAKPGSGTQARASCSGKISVPPVRNLHQSGF 560 
WD40-rpts                                                                                      

Query      561 SLSGSQADDHIARRTAQKIMAPPGGRSNITSLS 593 
WD40-rpts                                       

1 WD40-repeats found in QUERY=ENSMUSP00000112896 (Len=593):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 14   344-434      4.46  299.00  0.00580       20.0%     13.00

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  344-434    SGDLQVTGSAHCTFTTAQKAVGKDNFTLIPEGVNGIEERMSVVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWN

   WD40 Template    TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD