Input parameters:

  Query = ENSMUSP00000112746 (Len=200)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000112746, Len=200):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLSFLSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGVVVLYDLENASRQP 80  
WD40-rpts                                      (_________________WD 1_________________)        

Query       81 HYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVA 160 
WD40-rpts              (_________________WD 2_________________)(___________________WD 3________

Query      161 VGTRGPKVQLCDLKSGSCSHILQGIFSFFKYGTTTTFTKQ 200 
WD40-rpts      ___________)                            

3 WD40-repeats found in QUERY=ENSMUSP00000112746 (Len=200):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    33-72       8.30  457.54  4.2e-05       27.5%     47.23
  WD 2:  Seg  6    89-128      7.60  428.79  0.00010       32.5%     38.83
  WD 3:  Seg  9   129-172      5.66  348.29  0.00126       17.5%     51.34

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   33-72     -NKD-RDVERIHGSGVNTLDIEPVEGRY---MLSGGSDGVVVLYD
   WD 2   89-128    -SVG-RSHPDVHKYSVETVQWYPHDTGM---FTSSSFDKTLKVWD
   WD 3  129-172    TNTLQAADVFNFEETVYSHHMSP-AATKHCLVAVGTRGPKVQLCD

   WD40 Template    TGEC-LRTLSGHTSGVTSVSFSP-DGKR---LVSGSEDGTIKVWD