Input parameters:
Query = ENSMUSP00000112225 (Len=87)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSMUSP00000112225, Len=87):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLSGFTPVVSSTEELKFNSQVTKTDIKNGHVLFYLENVPKEATSLTFSIEQTNHVANIQPAPVTVYSYEKGEYAFDSYNI 80
WD40-rpts (_________________WD 1_________________)
Query 81 NSISDSQ 87
WD40-rpts
1 WD40-repeats found in QUERY=ENSMUSP00000112225 (Len=87):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 28-67 3.41 255.48 0.02223 22.5% 32.01
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 28-67 NGHVLFYLENVPKEATSLTFSIEQTNHVANIQPAPVTVYS
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD