Input parameters:

  Query = ENSMUSP00000111152 (Len=337)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000111152, Len=337):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPHRSRCLWAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPVVVFHAHDGPVYSMVS 80  
WD40-rpts                      (_____________WD 1_____________)             (________________WD

Query       81 TDRHLLSAGDGEVKGWLWAEILKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGAFTRAL 160 
WD40-rpts       2________________)            (_________________WD 3________________)   (______

Query      161 RGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPALTLW 240 
WD40-rpts      ___________WD 4________________)          (_________________WD 5________________

Query      241 HLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTASGNSC 320 
WD40-rpts      )   (_______________WD 6_______________)  (___________________WD 7______________

Query      321 RVDVFTNLGYRAFSLSF 337 
WD40-rpts      _____)           

7 WD40-repeats found in QUERY=ENSMUSP00000111152 (Len=337):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    17-48       7.19  411.63  0.00018       25.0%     44.95
  WD 2:  Seg  4    62-99       6.57  386.00  0.00039       20.0%     50.84
  WD 3:  Seg  9   112-150      8.02  445.92  6.1e-05       12.5%     45.18
  WD 4:  Seg 12   154-192     10.23  537.22  3.6e-06       32.5%     54.44
  WD 5:  Seg 17   203-241      6.17  369.71  0.00065       15.0%     42.74
  WD 6:  Seg 21   245-280      5.01  321.56  0.00289       12.5%     53.05
  WD 7:  Seg 25   283-326      7.82  437.49  7.9e-05       25.0%     54.78

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   17-48     --------QRLHMTIFSQSV-----SPCGKFLAAGNNYGQIAIFS
   WD 2   62-99     -KKPVVVFHAHDGPVYSM-V-----STDRHLLSAGDGEVKGWLWA
   WD 3  112-150    -RQPPYRTSLEVPEINALLL-----VPKENSLILAGGDCQLHSMD
   WD 4  154-192    -GAFTRALRGHTDYIHCLAL-----RERSPEVLSGGEDGAVRLWD
   WD 5  203-241    EVYKHEECSRPHNGRWIGCL-----ATDSDWMVCGG-GPALTLWH
   WD 6  245-280    -STPTTVFPIRAP-QKHVTF-----YQD--LILSAGQGCCVNHWQ
   WD 7  283-326    -GELKAQVPGSSPGLLSLSLNQQPAAPECKVLTASGNSCRVDVFT

   WD40 Template    TGECLRTLSGHTSGVTSVSF-----SPDGKRLVSGSEDGTIKVWD