Input parameters:

  Query = ENSMUSP00000109795 (Len=686)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000109795, Len=686):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAERRRAWNTEDDLPVYLARPGSAAQTPRQKYGGMFAAVEGAYENKTIDFDAYSVGRRGSARTPRSAGRPDAVGLPCPGG 80  
WD40-rpts                                                                                      

Query       81 SEDTASDVSEPSGSAVSSPGDRDDRPPALRIRCPAPRDLPLGRDNGQSDRLLIRGGRIINDDQSFYADVYLEDGLIKQIG 160 
WD40-rpts                                                                                      

Query      161 ENLIVPGGVKTIEANGRMVIPGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGSSLLTSFEKWHEA 240 
WD40-rpts                                                                                      

Query      241 ADTKSCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIA 320 
WD40-rpts                                                                                      

Query      321 QEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAIAGRINCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTD 400 
WD40-rpts                                                                                      

Query      401 GTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVW 480 
WD40-rpts                                          (___________________________________________

Query      481 DKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVV 560 
WD40-rpts      WD 1__________________________________________)                                 

Query      561 ISQGKIVFEDGNISVSKGMGRFIPRKPFPEHLYQRVRIRSKVFGLHSVSRGMYDGPVYEVPATPKHAAPAPSAKSSPSKH 640 
WD40-rpts                                                                                      

Query      641 QPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVAPPGGRSNITSLG 686 
WD40-rpts                                                    

1 WD40-repeats found in QUERY=ENSMUSP00000109795 (Len=686):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   437-527      4.60  304.70  0.00487       25.0%     12.09

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  437-527    CGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWD

   WD40 Template    TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD