Input parameters:

  Query = ENSMUSP00000107671 (Len=453)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000107671, Len=453):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAK 80  
WD40-rpts                                                                                      

Query       81 TRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQ 160 
WD40-rpts                  (__________________WD 1_________________)   (_________________WD 2__

Query      161 IAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELY 240 
WD40-rpts      ______________)   (__________________WD 3_________________)   (_________________

Query      241 FSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKL 320 
WD40-rpts      WD 4________________)   (_________________WD 5________________)                 

Query      321 EGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCD 400 
WD40-rpts                (_________________WD 6________________)  (_________________WD 7_______

Query      401 AGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGLASSVILSSEEAKFGGEHLSS 453 
WD40-rpts      _________)                                           

7 WD40-repeats found in QUERY=ENSMUSP00000107671 (Len=453):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    93-133      4.67  307.41  0.00447       17.5%     38.03
  WD 2:  Seg  7   137-175      8.39  461.10  3.8e-05       22.5%     53.24
  WD 3:  Seg 11   179-219      7.13  409.23  0.00019       22.5%     53.98
  WD 4:  Seg 15   223-261      7.06  406.41  0.00021       10.0%     53.95
  WD 5:  Seg 18   265-303      3.31  251.48  0.02513       12.5%     30.35
  WD 6:  Seg 23   331-369      5.00  321.02  0.00293       15.0%     34.35
  WD 7:  Seg 27   372-410      6.92  400.64  0.00025       15.0%     34.05

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   93-133    FPVEFEFRAHPWYISRHG--LTRNGQEKSAVCMTSMNRISTWD
   WD 2  137-175    GAMTWESPKQPSYIVWMT--TLPEM--QIAVTIDMQSTIKLWD
   WD 3  179-219    KEVLASKTGLFFGCKLLQSEFTKDG--PIVLVGDACGNLYIFR
   WD 4  223-261    LHLISKVNVFPYSIDELY--FSPQK--KWVFLIGHRLNDLTKV
   WD 5  265-303    SSLLRPSEFSAPVSTVLK--VPVIR--KVFWTPRREDRITLMS
   WD 6  331-369    GYLTASFSLAEDEGRPDY--FGVSD--KDVIVCSTRFSLLLFD
   WD 7  372-410    GLRLQTFHYCPEEIWRLW--VDPVH--VIVTCDAGSLDIYAWE

   WD40 Template    GECLRTLSGHTSGVTSVS--FSPDG--KRLVSGSEDGTIKVWD