Input parameters:

  Query = ENSMUSP00000106950 (Len=437)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000106950, Len=437):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAALRALRCLRGVGAPVLRPGSGIRLPSQPSRGARQWQPDIEWAEQFSGAVMYPSKETAHWKPPPWNDVDILKEKAVTNM 80  
WD40-rpts                                                                                      

Query       81 TLNFGPQHPAAHGVLRLVLELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSIAVEKLLN 160 
WD40-rpts                           (_____________________________WD 1_________________________

Query      161 IQPPPRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSGARMHAAYIRPGGVHQMLTNNR 240 
WD40-rpts      ____)                                                                           

Query      241 IWRNRTVDIGVVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEEMRQSLRIIEQ 320 
WD40-rpts                                                                                      

Query      321 CLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKA 400 
WD40-rpts                                                                                      

Query      401 PGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEIDR 437 
WD40-rpts                                           

1 WD40-repeats found in QUERY=ENSMUSP00000106950 (Len=437):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   102-165      2.96  236.92  0.03922       25.0%      3.42

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  102-165    SGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSIAVEKLLNIQPPP

   WD40 Template    TGECLRTLSGHTSGV-----------TSVSFSPDGKRLVSGSEDG-------------TIKVWD