Input parameters:

  Query = ENSMUSP00000106690 (Len=159)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000106690, Len=159):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDPCSVGVQLRTTHDCHKTFYTRHTGFKTLKELSSNDMLLLQLRTGMTLSGNNTICLHHVKIYIDRFEDLQKSCCDPFNI 80  
WD40-rpts                  (________________________________________________WD 1_______________

Query       81 HKKLAKKNLHVIDLDDATFLSAKFGRQLVPGWKLCPKCTQIINGSVDVDSDDRQRRKPDSDVCIEAIVLSTVWDFRYME 159 
WD40-rpts      ________________________________)                                              

1 WD40-repeats found in QUERY=ENSMUSP00000106690 (Len=159):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    13-113      3.05  240.67  0.03498       27.5%     10.24

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   13-113    THDCHKTFYTRHTGFKTLKELSSNDMLLLQLRTGMTLSGNNTICLHHVKIYIDRFEDLQKSCCDPFNIHKKLAKKNLHVIDLDDATFLSAKFGRQLVPGWK

   WD40 Template    TGECLRTL-SGHTSGV-----TSVS-------------------------FS----------PDG----------KRLVSGSEDGT----------IKVWD