Input parameters:

  Query = ENSMUSP00000105400 (Len=584)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000105400, Len=584):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPGSRPTCRALLAAESGGAAGCLPLARWTSPPRSPAQTPAKVISFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAK 80  
WD40-rpts                                                                                      

Query       81 KMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGSKKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRI 160 
WD40-rpts                                                                                      

Query      161 KNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAM 240 
WD40-rpts                                                                                      

Query      241 HRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR 320 
WD40-rpts                                                                                      

Query      321 GDTVRTLCLSYLTVLQKVANHVALLQAASTSKHQETVIKRICDRVFSRFPDFVQKSKDAAFETLSDPKYSGKMKVLQQLL 400 
WD40-rpts                                                                                      

Query      401 NHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANV 480 
WD40-rpts                                   (__________________________WD 1____________________

Query      481 VILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGE 560 
WD40-rpts      _____)                                                                          

Query      561 LFGVHNLFKLRSQGSCLTRDILEV 584 
WD40-rpts                              

1 WD40-repeats found in QUERY=ENSMUSP00000105400 (Len=584):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   430-486      3.01  238.90  0.03692       25.0%     24.39

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  430-486    SGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANVVILFDP

   WD40 Template    TGECLRTLSGHTS-----------------GVTSVSFSPDGKRLVSGSEDGTIKVWD