Input parameters:

  Query = ENSMUSP00000104730 (Len=503)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000104730, Len=503):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHLSKDKRVKSGKQAGASKLLRD 80  
WD40-rpts                                                                                      

Query       81 ARGLPVERLSHRPLEPGKSKPSSHKRKRVNSPLSRPKKGSSGKAPDRATKTVSYRTTPSGLQIMPLKKAQNGLENGDAGS 160 
WD40-rpts                                                                                      

Query      161 EKDESHFGNGSHQPDLELNDQLGEQEASDCDGTHSALVENGVGSALTNGGLNLHSPVKRKLETEKDYVFDKRLRYSVRQN 240 
WD40-rpts                                                                                      

Query      241 ESNCRFRDIVVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLLSAVGSVFCSGLDYSYLIGRLSSD 320 
WD40-rpts                    (____________________________WD 1___________________________)     

Query      321 RRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILG 400 
WD40-rpts                                                                                      

Query      401 VALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEEVNEKECVMLK 480 
WD40-rpts                                                                                      

Query      481 QLWSSSKGLDSLFSYLQDKIYEV 503 
WD40-rpts                             

1 WD40-repeats found in QUERY=ENSMUSP00000104730 (Len=503):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   255-315      2.86  232.83  0.04440       20.0%     12.54

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  255-315    EGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLLSAVGSVFCSGLDYSYLIG

   WD40 Template    TGECLRTLSGHTSGVTSVS---------------FSPDGKRLVSGSEDGTIKVWD------