Input parameters:

  Query = ENSMUSP00000103691 (Len=527)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000103691, Len=527):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNETMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGSPLTEEKEKIVWVRFENADLNDTSRNLEFH 80  
WD40-rpts                                                                                      

Query       81 ELHSTGNEPPLLVMIGYSDGMQVWGIPISGEAQELFSVRHGPVRAARILPAPQLGAQKCDNFAEKRPLLGVCKSIGSSGT 160 
WD40-rpts                                                                                      

Query      161 TPPYCCVDLYSLRTGEMVKSIQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWL 240 
WD40-rpts                                                                                      

Query      241 AYAENKLIRCHQSRGGACGDNIQSYTATVLSAAKTLKSGLTMVGKVVTQLTGTLPSGVTEDDVALHCNSRRSPLVPGIIT 320 
WD40-rpts                                                                                      

Query      321 VIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLH 400 
WD40-rpts                          (_________________WD 1_________________)                    

Query      401 RGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCS 480 
WD40-rpts      (______________WD 2_____________)                                               

Query      481 PVPGLSSSPSGSPLHGKHFPLMLLSSRFLLYHLGSDANFYSVCAEHS 527 
WD40-rpts                                                     

2 WD40-repeats found in QUERY=ENSMUSP00000103691 (Len=527):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 19   341-380      5.53  342.98  0.00148       20.0%     53.49
  WD 2:  Seg 24   401-433      4.89  316.51  0.00337       25.0%     43.54

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  341-380    -DGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQ
   WD 2  401-433    RGE-------TEAKVQDICFSHDCRWVVVSTLRGT-SHVFP

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGT-IKVWD