Input parameters:

  Query = ENSMUSP00000103384 (Len=524)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000103384, Len=524):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSWHPQYRSSKFRHVYGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGKLDPHYPKVCG 80  
WD40-rpts                               (_________________WD 1_________________)      (________

Query       81 HRGNVLDIKWNPFNDFEIASCSEDATIKIWNIPKQLLTRNLTTYRKELIGHARRVGLVEWHPTTANILFSAGYDYKVMVW 160 
WD40-rpts      _________WD 2_________________)          (_________________WD 3_________________

Query      161 NLDTKDSVIAGPVKTINCHQDVILSMSFNTNGSLLATTCKDRKIRIVDPRLGIVLQEASYKGHRANKVLFLGSLKKLLST 240 
WD40-rpts      )(_____________________WD 4____________________)   (___________________WD 5_____

Query      241 GTSRWNNRQMALWDQENLSVPLTEEDLDGSSGVLFPFFDSDTSMLYIVGKGDGNIRYYEVSMEKPHLTYLTEYRSYNPQK 320 
WD40-rpts      _____________)(____________________WD 6___________________) (__________________W

Query      321 GIGIMPKRGLDVSSCEIFRFYKLITTKSLIEPVSMIVPRRSESYQEDIYPPTAAAQPSLTAHEWLSGMNRGPIMMSLRPG 400 
WD40-rpts      D 7__________________)                                                          

Query      401 SELLDSQTLPPERPLSNSMVQVSPQPLEPMKQPAEDGDQAPFSLLEEKLAKWTAEHHLGEKSCLTNGFDVFECSPPKTEN 480 
WD40-rpts                                                                                      

Query      481 ELLQMFYRQQEEIRRLRELLIQREVQTKQLELEIKNLRMALGQL 524 
WD40-rpts                                                  

7 WD40-repeats found in QUERY=ENSMUSP00000103384 (Len=524):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    26-65       4.35  294.14  0.00675       10.0%     20.97
  WD 2:  Seg  6    72-111      7.19  411.65  0.00018       30.0%     44.40
  WD 3:  Seg 10   122-161      6.25  372.82  0.00059       27.5%     50.69
  WD 4:  Seg 14   162-208      7.98  444.20  6.4e-05       25.0%     51.97
  WD 5:  Seg 18   212-254      4.96  319.66  0.00306       25.0%     51.05
  WD 6:  Seg 22   255-299      5.61  346.30  0.00134       17.5%     50.62
  WD 7:  Seg 26   301-342      3.03  239.84  0.03588       17.5%     39.76

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   26-65     YDS-------VPITRSVHDNHFCAVNPHF-I-AVVTECAG----GGAFLVIPL
   WD 2   72-111    -DP-------HYPKVCGHRGNVLDIKWNPFN-DFEIASCS----EDATIKIWN
   WD 3  122-161    -TT-------YRKELIGHARRVGLVEWHP-TTANILFSAG----YDYKVMVWN
   WD 4  162-208    LDTKDSVIAGPVKTINCHQDVILSMSFNT-N-GSLLATTC----KDRKIRIVD
   WD 5  212-254    -GI-------VLQEASYKGHRANKVLFLG-S-LKKLLSTGTSRWNNRQMALWD
   WD 6  255-299    QEN--LSVPLTEEDLDGSSGVLFPFFDSD-T-SMLYIVGK----GDGNIRYYE
   WD 7  301-342    SME-----KPHLTYLTEYRSYNPQKGIGI-M-PKRGLDVS----SCEIFRFYK

   WD40 Template    TGE-------CLRTLSGHTSGVTSVSFSP-D-GKRLVSGS----EDGTIKVWD