Input parameters:

  Query = ENSMUSP00000103276 (Len=526)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000103276, Len=526):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTFVPVIPEAYSHVLAEFESLDPLLTALRLDSSRLRCTSIAVSRKWLALGSTGGGLNLIQKDGWKQRLFLSHREGAISQI 80  
WD40-rpts                                 (______________WD 1_____________)   (________________

Query       81 ACCSHDDDYVAVATSQGLVVVWELNQERRGKPERIHVSSEHKGRKVTALCWDTAVLRVFVGDHVGKVSAIKLNTLKQAKA 160 
WD40-rpts      _WD 2_________________) (_____________________WD 3____________________)         

Query      161 AAAFVMFPVQTVLTVDSCVVQLDYLDGRLLVSSLTRSFLCDTEREKFWKIGNKERHGEYGACFFPGRCAGGQQPVIYCAR 240 
WD40-rpts                                                                                      

Query      241 PGSRMWEVNFDGEVLSTHQFKKLLSMPPLPVITARSEPQYDHTVGSSQSLAFPKLLHLSEHCVLTWTEKGIYIFIPQNVQ 320 
WD40-rpts                                                                                      

Query      321 VLLWSEVKDIQDVAVYKNELFCLHFNGKISHLSLLSVERCVERLLRRGLWDLAARTCCLFQNSIITSRARKTLTADKLEH 400 
WD40-rpts                                                                                      

Query      401 LKSQLDLTACSELISQLDDLILRFEPLESACSSRRSSISSHESFSILDSGIYRIISSRRGSQSDEDSCSLHSQTFSEDER 480 
WD40-rpts                                                                                      

Query      481 LKEFASHQEEEQPEQGCGANRNEGMKDGSRFGSHCLPFSMLQHSCD 526 
WD40-rpts                                                    

3 WD40-repeats found in QUERY=ENSMUSP00000103276 (Len=526):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    28-60       4.52  301.19  0.00542       20.0%     42.97
  WD 2:  Seg  4    64-103      4.99  320.87  0.00295       17.5%     55.11
  WD 3:  Seg  8   105-151      4.59  304.25  0.00493       15.0%     52.01

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   28-60     --------------LRLDSSRLRCTS-IAVSRKWLALGSTGGGLNLIQ
   WD 2   64-103    -WK-------QRLFLSHREGAISQIACCSHDDDYVAVATSQGLVVVWE
   WD 3  105-151    NQERRGKPERIHVSSEHKGRKVTALC-WDTAVLRVFVGDHVGKVSAIK

   WD40 Template    TGE-------CLRTLSGHTSGVTSVS-FSPDGKRLVSGSEDGTIKVWD