Input parameters:

  Query = ENSMUSP00000102724 (Len=794)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000102724, Len=794):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASGASRYRLSCSLPGHELDVRGLVCCLYPPGAFVSVSRDRTTRLWAPDSPNRGFTEMHCMSGHSNFVSCVCIIPSSDIY 80  
WD40-rpts            (__________________WD 1_________________)       (___________________WD 2__

Query       81 PHGLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSLSSGKFGTLLSGSWDTTAKVWLNDKCMMTLQGHTAAVWAVKIL 160 
WD40-rpts      _________________)   (________________WD 3________________)(_________________WD 

Query      161 PEQGLMLTGSADKTIKLWKAGRCERTFLGHEDCVRGLAILSETEFLSCANDASIRRWQITGECLEVYFGHTNYIYSISVF 240 
WD40-rpts      4_________________)(_________________WD 5________________)  (_________________WD

Query      241 PNSKDFVTTAEDRSLRIWKHGECAQTIRLPAQSIWCCCVLENGDIVVGASDGIIRVFTESEERTASAEEIKAFERELSQA 320 
WD40-rpts       6________________)(_________________WD 7________________)                      

Query      321 TIDSKTGDLGDINAEQLPGREHLSEPGTREGQTRLIRDGERVEAYQWSVSDGRWIKIGDVVGSSGANQQTSGKVLYEGKE 400 
WD40-rpts                                                      (_________________WD 8__________

Query      401 FDYVFSIDVNEGGPSYKLPYNVSDDPWLVAYNFLQKNDLNPMFLDQVAKFIIDNTKGQTLGLGNTSFSDPFTGGGRYVPG 480 
WD40-rpts      _______)                                                                        

Query      481 TSGPSNTVQTADPFTGAGRYMPGSAGMDTTMTGVDPFTGNSAYRSAASKTVNIYFPKKEALTFDQANPTQILGKLKELNG 560 
WD40-rpts                                                                                      

Query      561 TAPEEKKLTEDDLVLLEKILSLICNNSSEKPTAQQLQILWKAINWPEDIVFPALDILRLSIKHPNVNENFCNEKGDQFSS 640 
WD40-rpts                                                                                      

Query      641 HLINLLNPKGKPANQLLALRTFCNCFVSQAGQKLMMSQRESLMSHAIELKSGSNKNIHIALATLTLNYSVCFHKDHNIEG 720 
WD40-rpts                                                                                      

Query      721 KAQCLSVISTILEVVQDLEATFRLLVALGTLISDDSNAIQLAKSLGVDSQIKKYVSVSEPAKVSECCRLVLHLL 794 
WD40-rpts                                                                                

8 WD40-repeats found in QUERY=ENSMUSP00000102724 (Len=794):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     7-47       5.63  347.03  0.00131       25.0%     51.77
  WD 2:  Seg  5    55-98       5.50  341.65  0.00155       22.5%     50.78
  WD 3:  Seg  9   102-139      7.65  430.77  9.7e-05       42.5%     49.79
  WD 4:  Seg 13   140-179     11.12  573.85  1.1e-06       40.0%     55.19
  WD 5:  Seg 17   180-218      8.62  470.54  2.8e-05       27.5%     52.34
  WD 6:  Seg 21   221-259     10.04  529.49  4.5e-06       37.5%     55.12
  WD 7:  Seg 25   260-298      7.94  442.71  6.7e-05       27.5%     53.24
  WD 8:  Seg 34   369-408      4.16  286.57  0.00853       20.0%     25.96

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    7-47     RYRLSCSLPGHELDVRGLVCCLYPPG-----AFVSVSRDRTTRLWA
   WD 2   55-98     -FTEMHCMSGHSNFVSCVCII-PSSDIYPHGLIATGGNDHNICIFS
   WD 3  102-139    -PMPLYILKGHKDTVCSLSSG-KFGT------LLSGSWDTTAKVWL
   WD 4  140-179    NDKCMMTLQGHTAAVWAVKIL-PEQG-----LMLTGSADKTIKLWK
   WD 5  180-218    AGRCERTFLGHEDCVRGLAIL-SETE------FLSCANDASIRRWQ
   WD 6  221-259    -GECLEVYFGHTNYIYSISVF-PNSK-----DFVTTAEDRSLRIWK
   WD 7  260-298    HGECAQTIRLPAQSIWCCCVL-ENGD------IVVGASDGIIRVFT
   WD 8  369-408    VSDGRWIKIGDVVGSSGANQQ-TSGK-----VLYEGKEFDYVFSID

   WD40 Template    TGECLRTLSGHTSGVTSVSFS-PDGK-----RLVSGSEDGTIKVWD