Input parameters:

  Query = ENSMUSP00000102671 (Len=184)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000102671, Len=184):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 APKCLKRDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKD 80  
WD40-rpts      (_____________________________________________________________________WD 1______

Query       81 IRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLC 160 
WD40-rpts      _______________________________________________________________)                

Query      161 VQPHHIGVSVKELDLYLAYFVHAA 184 
WD40-rpts                              

1 WD40-repeats found in QUERY=ENSMUSP00000102671 (Len=184):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-144      3.29  250.70  0.02574       27.5%     16.77

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-144    APKCLKRDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTD

   WD40 Template    TGECLRTLSGH------------T----------------------S--------------G---------------------------VTSVSFSPDGKRLVSG-SEDGTIK----------VW------------------D