Input parameters:

  Query = ENSMUSP00000101526 (Len=615)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000101526, Len=615):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAKVNITRDLIRRQVKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHK 80  
WD40-rpts                                         (_________________WD 1_________________)    (

Query       81 KLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHDLTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIR 160 
WD40-rpts      __________________WD 2_________________)   (_________________WD 3_______________

Query      161 QYDLRENSKHSEVLIDLTEYCGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMRQSPSAGVHTFCDRQK 240 
WD40-rpts      __)            (________________WD 4________________)   (_________________WD 5__

Query      241 PLPDGAAQYYVAGHLPVKLPDYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYKQRPYTFLLPRKCHSVEVQNG 320 
WD40-rpts      ______________)    (________________WD 6_______________)(______________________W

Query      321 KMSTNGVSNGVSNGLHLHSNGFRLPESKGCISPQVELPPYLERVKQQANEAFACQQWTQAIQLYSQAVQKAPHNAMLYGN 400 
WD40-rpts      D 7______________________)                                                      

Query      401 RAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDITA 480 
WD40-rpts                                                                                      

Query      481 ALFSKSDGEEKKAAGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTDIKEANFFGRRPPTSSECCRGM 560 
WD40-rpts                                                                                      

Query      561 SPLSTACSPIPATASWPPVASTLLCDCGTHDQRVKTSQAELWKIWRVHLRPTSGA 615 
WD40-rpts                                                             

7 WD40-repeats found in QUERY=ENSMUSP00000101526 (Len=615):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    36-75      10.54  549.99  2.4e-06       32.5%     44.29
  WD 2:  Seg  4    80-120      6.92  400.34  0.00025       32.5%     51.27
  WD 3:  Seg  8   124-163      6.72  392.41  0.00032       27.5%     51.05
  WD 4:  Seg 13   176-213      5.37  336.64  0.00181       17.5%     44.05
  WD 5:  Seg 16   217-255      5.11  325.64  0.00254       12.5%      8.26
  WD 6:  Seg 18   260-296      5.65  347.86  0.00128       20.0%     36.64
  WD 7:  Seg 21   297-346      3.22  247.55  0.02835       12.5%     13.00

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   36-75     RL------GLEAELQGHSGCVNCLEWNE-K-G--DLLASGS----DDQHTIVWD
   WD 2   80-120    -K------KLLSMHTGHTANIFSVKFLP-H-AGDRILITGA----ADSKVHVHD
   WD 3  124-163    -K------ETIHMFGDHTNRVKRIATAP-MWP--NTFWSAA----EDGLIRQYD
   WD 4  176-213    ---------DLTEYCGPMVEAKCLTVNPQD-N--NCLAVGA----SGPFVRLYD
   WD 5  217-255    -I------HNHRKSMRQSPSAGVHTFCD-R-Q--KPLPDGA----AQYYVAGHL
   WD 6  260-296    PD---------YNSRLRVLVATYVTFSP-N-G--TELLVNM----GGEQVYLFD
   WD 7  297-346    LTYKQRPYTFLLPRKCHSVEVQNGKMST-N-G--VSNGVSNGLHLHSNGFRLPE

   WD40 Template    TG------ECLRTLSGHTSGVTSVSFSP-D-G--KRLVSGS----EDGTIKVWD