Input parameters:

  Query = ENSMUSP00000099193 (Len=915)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000099193, Len=915):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASESDTEEFYDAPEDVHLGTGYPVGSPGKVGLLSFKEAENTANQAGNESPVQELRQDVSKKIIESIIEESQKVLQLEDD 80  
WD40-rpts                                                                                      

Query       81 SLDSKGKGLSDEATAGPSVAGTEFSNIPGLLAIEHELQQDSEKAESQNVAEESELETQKCFPSDETCEKSEKTVDETDNL 160 
WD40-rpts                                                                                      

Query      161 TEVSSGEQLDASGLEAETLNKEALEVKEGDVLDPASLDTLSTTDFAAVEEVAPAKPPRHLTPEPDIVASTKKPVPARPPP 240 
WD40-rpts                                                                                      

Query      241 PTNFPPPRPPPPSRPAPPPRKKKSELEFEALKTPDLDVPKENITSDSLLTTNMASENTVRDSLPSLDLASATSGDKIVTA 320 
WD40-rpts                                                                                      

Query      321 QENGKAPDVQTVAGEVMGPQRPRSNSGRELTDEEILASVMIKNLDTGEEIPLSLAEEKLPTGINPLTLHIMRRTKEYVSN 400 
WD40-rpts                                                                                      

Query      401 DATQSDDEEKLQSQQTDTDGGRLKQKTTQLKKFLGKSVKRAKHLAEEYGERAINKVKSVRDEVFHTDQDDPSSSDDEGMP 480 
WD40-rpts                 (_____________________WD 1____________________)(_________________WD 2

Query      481 YTRPVKFKAAHGFKGPYDFDQIKVVQDLSGEHMGAVWTMKFSHCGRLLASAGQDNIVRIWALKNAFDYFNNMRMKYNTEG 560 
WD40-rpts      _________________)   (_________________WD 3_________________)    (______________

Query      561 RVSPSPSQESLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKNYFLLSSSMDKTVRLWHISRR 640 
WD40-rpts      ___WD 4________________)              (________________WD 5________________)(___

Query      641 ECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEVDGQTKLITAANFCQNGKYAVIGTYDGRCIF 720 
WD40-rpts      _______________WD 6__________________)(___________________WD 7__________________

Query      721 YDTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGENKILVTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDF 800 
WD40-rpts      _)               (_______________WD 8______________)   (__________________WD 9__

Query      801 TYLVSGSEDKYVYIWSTYHDLSKFTSVRRDRNDFWEGIKAHNAVVTSAIFAPNPSLMLSLDVQSEKLEGIDKYEDAEVLD 880 
WD40-rpts      _______________)               (________________WD10________________)           

Query      881 STSTGIVKTDNTEVLLSADFTGAIKVFINKRKTVS 915 
WD40-rpts                                         

10 WD40-repeats found in QUERY=ENSMUSP00000099193 (Len=915):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   412-458      2.77  229.09  0.04973       15.0%     27.44
  WD 2:  Seg  9   459-498      5.54  343.33  0.00147        7.5%      8.83
  WD 3:  Seg 10   502-541      7.96  443.30  6.6e-05       30.0%     52.49
  WD 4:  Seg 14   546-584      7.21  412.38  0.00017       20.0%     35.34
  WD 5:  Seg 17   599-636      6.72  392.34  0.00032       27.5%     49.70
  WD 6:  Seg 21   637-678      7.28  415.35  0.00016       30.0%     55.11
  WD 7:  Seg 25   679-722      8.21  453.80  4.8e-05       27.5%     54.02
  WD 8:  Seg 30   738-772      6.44  380.66  0.00046       17.5%     48.76
  WD 9:  Seg 33   776-816      7.72  433.55  8.9e-05       32.5%     56.60
  WD10:  Seg 37   832-869      6.19  370.24  0.00064       20.0%     43.56

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  412-458    QSQ----QTDTDGGRLKQKTTQLKKFLGK--SVKR-AKHLAEEYGERAINKVKS
   WD 2  459-498    VRD----EVFHTDQ-------DDPSSSDD--EGMP-YTRPVKFKAAHGFKGPYD
   WD 3  502-541    -IK----VVQDLSG------EHMGAVWTM--KFSH-CGRLLASAGQDNIVRIWA
   WD 4  546-584    -FD----YFNNMRM-------KYNTEGRV--SPSP-SQESLSSSKSDTDMGVCS
   WD 5  599-636    -QR----PFCKYKG-------HTADLLDL--SWSK-NY-FLLSSSMDKTVRLWH
   WD 6  637-678    ISR---RECLCCFQ-------HIDFVTAI--AFHPRDDRYFLSGSLDGKLRLWN
   WD 7  679-722    IPDKKVALWNEVDG-------QTKLITAA--NFCQ-NGKYAVIGTYDGRCIFYD
   WD 8  738-772    RG---------RNK-------VGRKITGI--EPLP-GENKILVTSNDSRIRLYD
   WD 9  776-816    -LS----LSMKYKG-------YVNSSSQIKASFSH-DFTYLVSGSEDKYVYIWS
   WD10  832-869    -ND----FWEGIKA-------HNAVVTSA--IFAP-NPSLMLSLD-VQSEKLEG

   WD40 Template    TGE----CLRTLSG-------HTSGVTSV--SFSP-DGKRLVSGSEDGTIKVWD