Input parameters:

  Query = ENSMUSP00000099078 (Len=139)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000099078, Len=139):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDKQNSKLRPEVLQDLQNHKEFTDHELQEWYMGFLNDCPTGHLTVDNFKIQPNFFPYRDASKLTEHVFHTFDTNSDSTIN 80  
WD40-rpts      (___________________________________________________WD 1________________________

Query       81 SRVFIIAVSMTSWGKLEQKVKWAFSMSDLDSNGYISCSEMLEIVQAIYKMKMPEDKSMP 139 
WD40-rpts      ___________________________)                               

1 WD40-repeats found in QUERY=ENSMUSP00000099078 (Len=139):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-108      3.49  258.81  0.02007       22.5%      1.75

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-108    MDKQNSKLRPEVLQDLQNHKEFTDHELQEWYMGFLNDCPTGHLTVDNFKIQPNFFPYRDASKLTEHVFHTFDTNSDSTINSRVFIIAVSMTSWGKLEQKVKWAFSMSD

   WD40 Template    TGECLRTLS-----------GHT----------------SGVTS-------VSFSPDGKR---------LVSGSEDGTIK-------------------------VWD