Input parameters:

  Query = ENSMUSP00000098730 (Len=499)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000098730, Len=499):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSPPGRRARLASPGTSRPSSEAREELRRRLRDLIEGNRVMIFSKSYCPHSTRVKELFSSLGVVYNILELDQVDDGASVQ 80  
WD40-rpts                                                                                      

Query       81 EVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSAHDYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFV 160 
WD40-rpts                       (____________________________WD 1___________________________)  

Query      161 VPSPQGTTWGLGGTCVNVGCIPKKLMHQAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKG 240 
WD40-rpts                                                                                      

Query      241 VTYVNSFGEFVDLHKIKVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGRDSCTRKIGLEKIGVKINEKNGKIPV 320 
WD40-rpts                                                                                      

Query      321 NDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLLARRLFGVSLEKCDYINIPTTVFTPLEYGCCGLSEEKAIEMYKKEN 400 
WD40-rpts                                                                                      

Query      401 LEVYHTLFWPLEWTVAGRDNNTCYAKIICNKFDNERVVGFHLLGPNAGEITQGFAAAMKCGLTKQLLDDTIGIHPTCGEV 480 
WD40-rpts                                                                                      

Query      481 FTTLEITKSSGLDITQKGC 499 
WD40-rpts                         

1 WD40-repeats found in QUERY=ENSMUSP00000098730 (Len=499):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    98-158      2.90  234.50  0.04220       17.5%     15.90

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   98-158    NKVHVGGCDRTFQAHQNGLLQKLLQDDSAHDYDLIIIGGGSGGLSCAKEAANLGKKVMVLD

   WD40 Template    TGECLRTLSG----HTSG----VTSVSFSPDGKRLVSGSEDG-------------TIKVWD