Input parameters:

  Query = ENSMUSP00000098544 (Len=417)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000098544, Len=417):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGIGLQTKFNTLVGEKGAQMSGGQKQRIAIARALVRNPKILILDEATSALDTESESLVQTALEKASKGRTTIVVAHRLST 80  
WD40-rpts      (___________________________________WD 1___________________________________)    

Query       81 IRGADLIVTMKDGMVVEKGTHAELMAKQGLYYSLAMAQDIKKVDEQMESRTCSTAGNASYGSLCDVNSAKAPCTDQLEEA 160 
WD40-rpts                                                                                      

Query      161 VHHQKTSLPEVSLLKIFKLSKSEWPFVVLGTLASALNGSVHPVFSIIFGKLVTMFEDKNKATLKQDAELYSMMLVVLGIV 240 
WD40-rpts                                                                                      

Query      241 ALVTYLMQGLFYGRAEENLAMRLRHSAFKAMLYQAATSRLGIVTQDVSNMSLSILISFIYGWEMTLLILSFAPVLAVTGM 320 
WD40-rpts                                                                                      

Query      321 IQTAAMAGFANRDKQALKRAGKIATEAVENIRTVVSLTRERAFEQMYEETLQTQHRPAHPNFSCDFTKRKSSANTTKKYR 400 
WD40-rpts                                                                                      

Query      401 FPRNHLILSEGTESTYF 417 
WD40-rpts                       

1 WD40-repeats found in QUERY=ENSMUSP00000098544 (Len=417):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-76       2.94  236.22  0.04006       25.0%      2.88

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-76     MGIGLQTKFNTLVGEKGAQMSGGQKQRIAIARALVRNPKILILDEATSALDTESESLVQTALEKASKGRTTIVVAH

   WD40 Template    TGECLRTLSGHTSGVTSVSFSP--------------DGKR----LVSGSED------------------GTIKVWD