Input parameters:

  Query = ENSMUSP00000097072 (Len=320)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000097072, Len=320):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKALSSKADSLLLKSSVDAYTESTRLGPKRTSDSATLSVDAESSDEDSAPGLDDFSGLSPYERKRLRNIRENANFFASLQ 80  
WD40-rpts                                                                                      

Query       81 LAETLVSLLVGVACCPSLNSAARLRGMIKKRESPESKRKRPKKKENEIGCRRSMRLLKVDPLGVSLPASPTQPTLVEEEE 160 
WD40-rpts                                                                                      

Query      161 NPLLPPGPLEMIPENQDDSSELLKASLKTWAEMSQTSNEKTKKGLSSIKSYKANLSGMVISEATVRKVTKGAISSVALHP 240 
WD40-rpts                                                               (___________________WD 

Query      241 SEVRTLVAAGAKSGQIGLWDLTQQSEDAMYVFYAHSRYVSCLSFSPTNPAHLLSLSYDGTLRCGDFSSAVFEEVGSDQEA 320 
WD40-rpts      1__________________)     (_________________WD 2_________________)               

2 WD40-repeats found in QUERY=ENSMUSP00000097072 (Len=320):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   218-260      6.21  371.17  0.00062       22.5%     38.49
  WD 2:  Seg  4   266-305      7.66  431.19  9.6e-05       32.5%     52.17

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  218-260    MVISEATVRKVTKGAISSVALHP-SEVRTLVAAGAKSGQIGLWD
   WD 2  266-305    -E-DAMYVFYAHSRYVSCLSFSPTNPAH--LLSLSYDGTLRCGD

   WD40 Template    TG-ECLRTLSGHTSGVTSVSFSP-DGKR--LVSGSEDGTIKVWD