Input parameters:

  Query = ENSMUSP00000096163 (Len=138)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000096163, Len=138):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRGALQAVALWGRKAPPHSITAIMITDDQQTIVTGSQEGQLCLWSLSPELKISAKELLFGHSASVTCLARARDFSKQPYV 80  
WD40-rpts           (_________________WD 1_________________)(_______________________WD 2_______

Query       81 VSAAENGAHLCTLHLWHFGMRSFVVETCATQGGCGTSALWPLDVSSVFLVAMRFLESG 138 
WD40-rpts      ________________)                                         

2 WD40-repeats found in QUERY=ENSMUSP00000096163 (Len=138):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     6-45       8.28  456.55  4.4e-05       20.0%     44.76
  WD 2:  Seg  5    46-97       5.70  350.16  0.00119       27.5%     44.48

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-45     QA-----VALWGRKAPPHSITAIMIT---DDQQTIVTGSQEG----QLCLWS
   WD 2   46-97     LSPELKISAKELLFGHSASVTCLARARDFSKQPYVVSAAENGAHLCTLHLWH

   WD40 Template    TG-----ECLRTLSGHTSGVTSVSFS---PDGKRLVSGSEDG----TIKVWD