Input parameters:

  Query = ENSMUSP00000096162 (Len=117)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000096162, Len=117):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRGALQAVALWGRKAPPHSITAIMITDDQQTIVTGSQEGQLCLWSLSPELKISAKELLFGHSASVTCLARARDFSKQPYV 80  
WD40-rpts           (_________________WD 1_________________)        (_________________WD 2_____

Query       81 VSAAENGEMCMWNVSSGQCVEKTSLPPDILRFLSVLI 117 
WD40-rpts      ____________)                        

2 WD40-repeats found in QUERY=ENSMUSP00000096162 (Len=117):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     6-45       8.64  471.52  2.7e-05       20.0%     52.29
  WD 2:  Seg  6    54-93       7.63  429.94  1.0e-04       27.5%     39.50

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-45     QAVALWGRKAPPHSITAIMITDDQQT---IVTGSQEGQLCLWS
   WD 2   54-93     ---AKELLFGHSASVTCLARARDFSKQPYVVSAAENGEMCMWN

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKR---LVSGSEDGTIKVWD