Input parameters:

  Query = ENSMUSP00000095279 (Len=303)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000095279, Len=303):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIGPARWDTASGEELHTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVV 80  
WD40-rpts                (__________________WD 1_________________)   (_________________WD 2____

Query       81 ATGSMDTTAKLWDIQNGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFNWD 160 
WD40-rpts      ____________)   (_________________WD 3________________)   (_________________WD 4

Query      161 CSLILTGSMDKTCMLWDATSGKYVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCVTKLEGHEGEISKIS 240 
WD40-rpts      ________________)   (_________________WD 5________________)   (_________________

Query      241 FNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 303 
WD40-rpts      WD 6________________)   (_________________WD 7________________)

7 WD40-repeats found in QUERY=ENSMUSP00000095279 (Len=303):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    11-51       9.02  487.07  1.7e-05       42.5%     53.05
  WD 2:  Seg  5    55-93      10.65  554.43  2.1e-06       40.0%     57.64
  WD 3:  Seg  9    97-135     10.68  555.94  2.0e-06       45.0%     53.50
  WD 4:  Seg 13   139-177     10.05  529.88  4.5e-06       35.0%     53.66
  WD 5:  Seg 17   181-219      9.95  525.87  5.1e-06       32.5%     55.18
  WD 6:  Seg 21   223-261     10.86  563.45  1.6e-06       40.0%     57.60
  WD 7:  Seg 25   265-303     10.08  530.86  4.4e-06       35.0%     47.61

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   11-51     SGEELHTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWS
   WD 2   55-93     -GKCYHTFRGHTAEIVCLSFN-PQSTVVATGSMDTTAKLWD
   WD 3   97-135    -GEEVVTLTGHLAEIISLSFD-TSGDRIITGSFDHTVVVWD
   WD 4  139-177    -GRKVHTLIGHCAEISSALFN-WDCSLILTGSMDKTCMLWD
   WD 5  181-219    -GKYVATLTGHDDEILDSCFD-YTGKLIATASADGTARVYN
   WD 6  223-261    -RKCVTKLEGHEGEISKISFN-PQGNRLLTGSSDKTARIWD
   WD 7  265-303    -GQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNSCRIWR

   WD40 Template    TGECLRTLSGHTSGVTSVSFS-PDGKRLVSGSEDGTIKVWD