Input parameters:

  Query = ENSMUSP00000093392 (Len=842)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000093392, Len=842):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGLGKTIQVISFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGS 80  
WD40-rpts                                                                                      

Query       81 KKDNELLRLKQRKCEIALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKE 160 
WD40-rpts                                                                                      

Query      161 LWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQLPKKEDRMVYC 240 
WD40-rpts                                                                                      

Query      241 SLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSRGDTVRTLCLSYLTVLQKVANHVALLQAASTSKH 320 
WD40-rpts                                                                                      

Query      321 QETVIKRICDRVFSRFPDFVQKSKDAAFETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFSTKLLDVLQQYCMASGLD 400 
WD40-rpts                                                                                  (___

Query      401 YRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLR 480 
WD40-rpts      _______________________WD 1_________________________)                           

Query      481 LISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELFGVHNLFKLRSQGSCLTRDILEREGQVEAGIM 560 
WD40-rpts                                                                                      

Query      561 TATTWLKGEPSAQELETPRDPDCQEPTDVCELYSDISDEESVGHSLGKTDKHKFSDTSRTPGFPAQLTLLQCGFSKLFEA 640 
WD40-rpts                                                                                      

Query      641 KYKSDQDGDGNPVPSDGSSDEQPMCLSAEARQAARQKTWDSVCTSEHQKSDNIQTPDEKCVSDKSEKTLEQNVSSESDDE 720 
WD40-rpts                                                                                      

Query      721 TKDHRTAGHHCMGQGDTESEDSDVIFPTQYPTQRIPKNHIRFKLLLGESEDSEAENPVKVNHGDDRQNSGRGNGPVPNLL 800 
WD40-rpts                                                                                      

Query      801 CLENMTSKSVRKRKGTDDISDESDDIDMFPKSRIRKQRATTS 842 
WD40-rpts                                                

1 WD40-repeats found in QUERY=ENSMUSP00000093392 (Len=842):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   397-453      2.96  237.13  0.03896       25.0%     24.53

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  397-453    SGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANVVILFDP

   WD40 Template    TGECLRTLSGHTS-----------------GVTSVSFSPDGKRLVSGSEDGTIKVWD