Input parameters:

  Query = ENSMUSP00000093021 (Len=351)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000093021, Len=351):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGSQSLNSTFLKVRRLSLISSNERLLGQTSGLATGSRLVTQEVDDLRVIPGSRPDLDDHQPQCSLAELPSTAHGKRKPGH 80  
WD40-rpts      (____________________WD 1___________________)                                   

Query       81 LPRLRSSAVKGHAPDPNPSLSIVSKRIFKGESVIKGPEDRQTFVGPSGLPKISPKATAGEAQGKKRTMELLNKARKQEEK 160 
WD40-rpts                                                                                      

Query      161 VSNLLDIRQLPKQEVFINNTHPCKKHLKQQPMSLEEWRRGHLGGDNTGLISQEPFRCCKRLGKKAQCQLLEVTSLEAEAS 240 
WD40-rpts                                                                                      

Query      241 LEVLKRRRRMQAMEMSKKPQDRGLGQEKAVFLSREKVKPSSHDMHLSTAERSFKPKSMPKAEDWDLSVQGTPVVLTVRDH 320 
WD40-rpts                                                                                      

Query      321 SNVSQAQKHLGCAEIFHSRDGRCTLLKRGGA 351 
WD40-rpts                                     

1 WD40-repeats found in QUERY=ENSMUSP00000093021 (Len=351):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-45       3.08  241.74  0.03386       22.5%      3.30

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-45     MGSQSLNSTFLKVRRLSLISSNERLLGQTSGLATGSRLVTQEVDD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKR-----LVSGSEDGTIKVWD