Input parameters:

  Query = ENSMUSP00000092079 (Len=849)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000092079, Len=849):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKKMCALTISFLLLKFSLILCCLKEPICFWRIKSSEYNDGNLQSECGYFVWTMKKLMKDDFYNVWLDFRIPASEYEFVLV 80  
WD40-rpts                                                                                      

Query       81 MFFATNEINKNPDLLPNTSLVFSVMAGNCQDSLGNLDIQYMLTNDSLNYVNYVCDIDDSCAIGLTGPSWKTSLKLAIDSW 160 
WD40-rpts                                                                                      

Query      161 TPTVFFGPFNPKLSDHDHFPYVHQIATKDTHLSHGMVSLMLHFRWTWIGLVISDDDQGVQLHSDLREESQRHGICLAFVN 240 
WD40-rpts                                                                             (________

Query      241 VIPETMKIYMTRGNMYDKQIMTSSAKVVIIYGEMNSTLEISFRRWAYLGARRIWITTSQWDVITNKKDFSLDLFHGTVTF 320 
WD40-rpts      _____________________WD 1_____________________________)                         

Query      321 AHHKGWIAKFKNFMQTMNTSKYPINISQSVLRWNYFNCSVSKNSIKMDHFTCENPLELTALHNYDMALSDEGYNLYNAVY 400 
WD40-rpts                                                                                      

Query      401 AVAHTYHEHILQQVESQKMAEDKGEYTECQQLAPLLKTRVFTNPVGEMVNMNHREYQCAEYDIFIIWNFPQGLGLKVKIG 480 
WD40-rpts                                                                                      

Query      481 SYFPCFPQSQQLHISEDLEWATGGTSVPSSMCSVTCTPGFRKIHQKETADCCFDCVQCPENEVSNETDMEQCVRCPDDQY 560 
WD40-rpts                                                                                      

Query      561 ANLEQTHCLQRAVSFLAYEDPLGMALGCMALSFTAITILVLVTFVKYRDTPIVKANNCILSYILLISLVFCFLCSLLFIG 640 
WD40-rpts                                                                                      

Query      641 HPNQVTCILQQTTFGLFFTVAVSTVLAKTITVVMAFKLTTPGGRMRGMMMMTGAPKLVIPICTLIQLVLCGIWLLTSPPF 720 
WD40-rpts                                                                                      

Query      721 IDRDIQSEHGKTVIFCNTGSVLAFHVVLGYLGSLALGSFTVAFLARNLPDRFNEAKFLTFSMLVFCSVWITFLPVYHSTR 800 
WD40-rpts                                                                                      

Query      801 GKVMVVVEVFSILASSAGLLGCIFVPKCYAILVRPDSNCIQKYKGKLLY 849 
WD40-rpts                                                       

1 WD40-repeats found in QUERY=ENSMUSP00000092079 (Len=849):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   232-295      2.77  229.04  0.04981       15.0%     28.13

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  232-295    HGICLAFVNVIPETMKIYMTRGNMYDKQIMTSSAKVVIIYGEMNSTLEISFRRWAYLGARRIWI

   WD40 Template    TGECLRTLSGHTSGVTSV-----------SFSPDGKRLVSGSEDG-------------TIKVWD