Input parameters:

  Query = ENSMUSP00000089537 (Len=445)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000089537, Len=445):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEEDIDTRKINNSFLRDHSYATEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQVHRRGEYNVYSTFQSHEPEF 80  
WD40-rpts                   (_________________WD 1________________)                       (____

Query       81 DYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEEGRLRDPATITTLRVPVLRPMDLMV 160 
WD40-rpts      _______________WD 2___________________)                                         

Query      161 EATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFMPDIVDIKPANMEELTEVITAAEFHPHHCNTF 240 
WD40-rpts         (________________WD 3_______________)           (__________________WD 4______

Query      241 VYSSSKGTIRLCDMRASALCDRHTKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIET 320 
WD40-rpts      ____________)                   (________________WD 5________________)          

Query      321 YQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGK 400 
WD40-rpts          (___________________WD 6___________________)   (_________________WD 7_______

Query      401 RRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN 445 
WD40-rpts      _________)                                   

7 WD40-repeats found in QUERY=ENSMUSP00000089537 (Len=445):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    14-52       7.64  430.33  9.9e-05       15.0%     42.50
  WD 2:  Seg  5    76-119      4.87  315.71  0.00346       15.0%     47.67
  WD 3:  Seg 11   164-200      6.08  365.69  0.00073       22.5%     47.17
  WD 4:  Seg 15   212-253      6.58  386.41  0.00039       25.0%     35.75
  WD 5:  Seg 19   273-310      6.69  391.18  0.00033       27.5%     41.16
  WD 6:  Seg 23   325-368      5.41  338.28  0.00172       10.0%     43.23
  WD 7:  Seg 26   372-410      5.00  321.28  0.00291        7.5%     22.61

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   14-52     -FLRD-HSYAT--EAD----IISTVEFNH--TGELLATGDKGGRVVIFQ
   WD 2   76-119    HEPEF-DYLKSLEIEE----KINKIRWLPQQNAAYFLLSTNDKTVKLWK
   WD 3  164-200    PRRVF---ANA--HTY----HINSISVNS--DYETYMS-ADDLRINLWN
   WD 4  212-253    IVDIKPANMEE--LTE----VITAAEFHP-HHCNTFVYSSSKGTIRLCD
   WD 5  273-310    -PSNR-SFFSE--IIS----SISDVKFSH--SGRYIMTRD-YLTVKVWD
   WD 6  325-368    DYLRS-KLCSL--YENDCIFDKFECVWNG--SDSVIMTGSYNNFFRMFD
   WD 7  372-410    -KRDV-TLEAS--REN----SKPRAILKP--RKVCVGGKRRKDEISVDS

   WD40 Template    TGECL-RTLSG--HTS----GVTSVSFSP--DGKRLVSGSEDGTIKVWD