Input parameters:

  Query = ENSMUSP00000082948 (Len=663)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000082948, Len=663):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MELGNGKLPRTGLNSLNQAVHPTWGLAWTDGNRVVLTDLQLHSGEAKFGDSRVIGRFESVCGVCWAPVRTVRSPALLAIQ 80  
WD40-rpts                                                                                      

Query       81 HRKLVSVWQLCPSTAGASKWQASQTSEVRESLPILPRGCVWHPKDAVLTVLTAQGVSIFPNVHQDGSRVKVDVNTKGRVY 160 
WD40-rpts                                                                      (_______________

Query      161 CACWTLDGQRLVVAIDSNLHSYIWDSSQKSLHSCSFCPVFPVNCSIRSIEATGNSQVAIATELPLHKLCSLNASEALDGP 240 
WD40-rpts      ___WD 1_________________)                                                       

Query      241 PNGDDGSVHTRPVDEQVATMDMNSGVTVSPFSVPLDLTHIHFNPSQAEQSSLICLRKKDYLTGTGQDSSHLILVTFKKAI 320 
WD40-rpts                                                                                      

Query      321 TITKKVAIPGILVPDLIAFNLTAELVAVASNTCNVILIYSAAPSSMPNIQQIQLESNERPKGICFLTDRLLLIAVGKQKP 400 
WD40-rpts                                                                                      

Query      401 SEAAFLPSSEYGQYTVRLIVREMAQGSESSGTSAESQGAYSDFTALLSKADREKFTDSLSPGSSPLSQGLLLTPNSSTQS 480 
WD40-rpts                                                                                      

Query      481 GRSGRALIQEIKSPLSPLSSDSVVHETLHRPPWLCPALPRPSRTPEHTSTPELNSPQRENLQKEKETCPLSRELEILSRH 560 
WD40-rpts                                                                                      

Query      561 LVAMQQYLSELTGFLHKEKRVAPAYPPSQDAPYVHLIYQNPCSVGPTERRAVLLCDGKLRLSTVQQMFGLHLVEMLHEVL 640 
WD40-rpts                                                                                      

Query      641 SSIPSNHMVTHNLHGPGGLFWSV 663 
WD40-rpts                             

1 WD40-repeats found in QUERY=ENSMUSP00000082948 (Len=663):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   145-185      3.66  265.65  0.01626       22.5%     45.74

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  145-185    DGSRVKVDVNTKGRVYCACWTLDGQRLVVAIDSNLHSYIWD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIK-VWD