Input parameters:

  Query = ENSMUSP00000082821 (Len=815)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000082821, Len=815):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGGHCGSFAASAASSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRT 80  
WD40-rpts                                                                                      

Query       81 KELDLRGVSINVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKVTNTARSSVDARNGLNSMEGEA 160 
WD40-rpts                                                                                      

Query      161 RGNGTQPVLAGNGEDTIRLGVPVDPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVV 240 
WD40-rpts                                                                                      

Query      241 GGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPIT 320 
WD40-rpts                              (__________________WD 1_________________)               

Query      321 SYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAVTALSVYLTPKTSVSGNWIEIAYGTSSGAVRV 400 
WD40-rpts                                                                                      

Query      401 IVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESH 480 
WD40-rpts                                                                                      

Query      481 GSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGH 560 
WD40-rpts                                                        (_____________________WD 2____

Query      561 TNGSIQMWDLTTAMDMVNKTEDKDAGGPTEEELLKLLDQCDLSTSRCATPNISPATSVLQHSRLRESSSSLQLQHHETIH 640 
WD40-rpts      ________________)                                                               

Query      641 EAATYGATRPYRESPLLARARRTESFHSYRDFQTLNLNRSIERPVPENGHMGPAQTEVKGAAGECAMSERRSPGTEVRCG 720 
WD40-rpts                                                                                      

Query      721 RESDGGLEVHRTAEGLSEPKKRSAEDENEHKVEFRKKGFEAGGFLGRKKVPYLASSPSTSDGGTDSPGTASPSPTKTTPS 800 
WD40-rpts                                                                                      

Query      801 PRHKKSDSSGQEYSL 815 
WD40-rpts                     

2 WD40-repeats found in QUERY=ENSMUSP00000082821 (Len=815):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 11   265-305      3.58  262.63  0.01785       27.5%     21.88
  WD 2:  Seg 28   531-577      2.81  230.53  0.04761       20.0%     19.75

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  265-305    QDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWN--------
   WD 2  531-577    -CTTISSFTVREC-EGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMV

   WD40 Template    TGECLRTLSGHTS-GVTSVSFSPDGKRLVSGSEDGTIKVWD--------