Input parameters:

  Query = ENSMUSP00000082220 (Len=952)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000082220, Len=952):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MENLLPPSGFSYLKKYPLHSIRKYLSTLRSQRAEEQVARFQKIPNVENETMIPVLTSKRASELAVSEVAGLLQADLQNGL 80  
WD40-rpts                                                                                      

Query       81 NKSEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAVISILMRQFDDAVSITVAIVIVVTVAFVQEYRSEK 160 
WD40-rpts                                                                                      

Query      161 SLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVCLSVGDRVPADLRLFEAVDLSVDESSLTGETAPCSKVTAPQPAAN 240 
WD40-rpts                                                                                      

Query      241 GDLASRSNIAFMGTLVRCGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFYSFGIIGIIMLVGWLL 320 
WD40-rpts                                                                                      

Query      321 GKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHILT 400 
WD40-rpts                                                                                      

Query      401 SDGLHAEVTGVGYNQFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYI 480 
WD40-rpts                                                                                      

Query      481 RKAEYPFSSEQKWMAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYNSKGQTLALTQQQRDLYQQEKARMGSAGLRVLAL 560 
WD40-rpts                                                                                      

Query      561 ASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAIAIASRLGLYSKTSQSVSGEEVDTMEVQHL 640 
WD40-rpts                                        (_____________________________________________

Query      641 SQIVPKVAVFYRASPRHKMKIIKSLQKNGAVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTIMS 720 
WD40-rpts      WD 1____________________________________________)                               

Query      721 AIEEGKGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWK 800 
WD40-rpts                                                                                      

Query      801 DSILTKNLILKILVSSIIIVCGTLFVFWRELRDNVITPRDTTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYA 880 
WD40-rpts                                                                                      

Query      881 VLGSIMGQLLVIYFPPLQKVFQTESLSILDLLFLLGLTSSVCIVSEIIKKVERSREKVQKNAGSASSSFLEV 952 
WD40-rpts                                                                              

1 WD40-repeats found in QUERY=ENSMUSP00000082220 (Len=952):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 17   595-689      3.74  269.06  0.01464       25.0%     21.44

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  595-689    SGVSIKMITGDSQETAIAIASRLGLYSKTSQSVSGEEVDTMEVQHLSQIVPKVAVFYRASPRHKMKIIKSLQKNGAVVAMTGDGVNDAVALKAAD

   WD40 Template    TGECLRTLSGHT-----------------SGVTS------VS----------------FSPD-----------GKRLVSGSEDGTIK-----VWD