Input parameters:

  Query = ENSMUSP00000082051 (Len=464)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000082051, Len=464):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEIHLPSLPMMEILSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLYCDMVTLQLHGKKTWKQFFFYRTWQEHAK 80  
WD40-rpts                                                                                      

Query       81 SRAKPEDFTYKEIPVEFEFRAYAYYISRHGLTRNGQGKSAVCMVTSTNRISTWDIHEGAMTWESPVQESYIELMTTLPEM 160 
WD40-rpts      (________________________WD 1________________________)   (_________________WD 2_

Query      161 HIAVTVDISSTIKLWDCHNRDALATKSIFSPCQILKAVFTKDGPIVLVGDTSGNLYIFRIPDLHLISRHNVFPYAIDELH 240 
WD40-rpts      _______________)   (_________________WD 3_________________)   (_________________

Query      241 CSPQNKWVLLIIRNPQVLTKVVYMSSLLRTSEFSDPVSTSLKFPLCQGVFWTPRREDRITLMARNAPPRPAKFGTFDMKL 320 
WD40-rpts      WD 4________________)   (_________________WD 5________________)                 

Query      321 EEIGNKVTVQGHLVASFSLQDYKERAEWMGVSEKDTIVCSTGSSLLLFDMNGLRLQTFQYCPEQIFRLWVDPVHVIVTCN 400 
WD40-rpts                (_________________WD 6________________)  (_________________WD 7_______

Query      401 DGSLDIYAWEERSPLLRKCYRLQNRRYLLPSSFINNALCDDVSIIGVMISSPSFCYLMAYTLNS 464 
WD40-rpts      _________)                                                      

7 WD40-repeats found in QUERY=ENSMUSP00000082051 (Len=464):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    81-134      3.48  258.59  0.02021       12.5%     36.20
  WD 2:  Seg  5   138-176      8.08  448.42  5.6e-05       22.5%     51.63
  WD 3:  Seg  9   180-219      6.88  398.66  0.00026       20.0%     52.48
  WD 4:  Seg 13   223-261      7.13  409.17  0.00019        7.5%     52.83
  WD 5:  Seg 17   265-303      3.38  254.38  0.02299       17.5%     24.16
  WD 6:  Seg 22   331-369      6.25  372.72  0.00059       12.5%     39.91
  WD 7:  Seg 26   372-410      6.31  375.33  0.00054       15.0%     38.08

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   81-134    SRAKPEDFTYKEIPVEFEFRAYAYYIS-RHGLTRNGQGKSAVCMVTSTNRISTWD
   WD 2  138-176    -GAM--------------TWESPVQES-YIELMTTLPEMHIAVTVDISSTIKLWD
   WD 3  180-219    -RDA--------------LATKSIFSPCQILKAVFTKDGPIVLVGDTSGNLYIFR
   WD 4  223-261    -LHL--------------ISRHNVFPY-AIDELHCSPQNKWVLLIIRNPQVLTKV
   WD 5  265-303    -SSL--------------LRTSEFSDP-VSTSLKFPLCQGVFWTPRREDRITLMA
   WD 6  331-369    -GHL--------------VASFSLQDY-KERAEWMGVSEKDTIVCSTGSSLLLFD
   WD 7  372-410    -GLR--------------LQTFQYCPE-QIFRLWVDPVHVIVTCNDGSLDIYAWE

   WD40 Template    TGEC--------------LRTLSGHTS-GVTSVSFSPDGKRLVSGSEDGTIKVWD