Input parameters:

  Query = ENSMUSP00000081959 (Len=477)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000081959, Len=477):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 PAAYSGTETHTSGTEGFCWAAAAPALRCPDLPDKSAWYSPGIPRCCRPDVMESPGGSAPLLGLELCAAARDSAAMAGPGA 80  
WD40-rpts                                                                                      

Query       81 PCDPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKAELLAKFSEKLKSEPKDAISTRHEDWREEVSGTGPDQ 160 
WD40-rpts                                                                                      

Query      161 VSSPASLRVKWQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQLEERQDRLEALQACVVQLQEARAQQSRQLEERQAENAA 240 
WD40-rpts                                                                                      

Query      241 QREAYETLLQQAVHQEAALRRLQEEARDLLEQLVQRKARAAAERNLRNERRERANQALVSQELKKAAKRTVSISEIPNTL 320 
WD40-rpts                                                                                      

Query      321 EDGTKEETVALAPAALPEFSESETCEKWKRPFRSASATSLTLSRCVDVVKGLLDFKKRRGHSVGGAPEQRYQSIPVCVSA 400 
WD40-rpts              (_________________WD 1________________)                                 

Query      401 QIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSVRRLCPTA 477 
WD40-rpts         (_________________WD 2________________)                                   

2 WD40-repeats found in QUERY=ENSMUSP00000081959 (Len=477):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   329-367      3.00  238.53  0.03734       10.0%      0.59
  WD 2:  Seg  4   404-442      9.92  524.60  5.3e-06       30.0%     41.68

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  329-367    VALAPAALPEFSESETCEKWKRPFRSASATSLTLSRCVD
   WD 2  404-442    SQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWN

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD