Input parameters:

  Query = ENSMUSP00000080241 (Len=320)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000080241, Len=320):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDIENVILAKVQEDEEDNSEAILKSDKLHQDLFYMERVLMENVFQPKLAAYRQLPVYKEHEPEEPEETLQVENLKVAEDE 80  
WD40-rpts                                                                                      

Query       81 PKKEDEEEVEMELELEIATEQSTIPANLERLWSFSCDLTKGLNVSSLSWNKANPWPERIYQSSYGVTSVDFSNSSPNLLA 160 
WD40-rpts                                                        (__________________WD 1_______

Query      161 VGYHNGTVAIYNVQSSHNIPVLDSSESPQKHLGPVWQVQWIEQDRGTTGDDKREILVSISADGRISKWIIRKGLDCHDLM 240 
WD40-rpts      ___________)           (____________________WD 2____________________)           

Query      241 RLKRTTATGGKKGGEKEKKGEALISRQAPGMCFAFHPKDTNIYLAGTEEGLIHKCSCSYNEQYLETYRGHKFGPSDRECC 320 
WD40-rpts                                                                                      

2 WD40-repeats found in QUERY=ENSMUSP00000080241 (Len=320):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   131-172      3.20  246.82  0.02899       30.0%     43.25
  WD 2:  Seg  9   184-229      3.19  246.39  0.02937       30.0%     37.73

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  131-172    KANPWPERIYQSSYGVTSVDFSNSSPNL---------LAVGYHNGTVAIYN
   WD 2  184-229    SSE---SPQKHLG-PVWQVQWIE-QDRGTTGDDKREILVSISADGRISKWI

   WD40 Template    TGECLRTLSGHTS-GVTSVSFSP-DGKR---------LVSGSEDGTIKVWD