Input parameters:

  Query = ENSMUSP00000079460 (Len=466)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000079460, Len=466):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEVYLPSLPMMKILSYLDAYSLLQVAQVNKNWNELASSDVLWRRLCQKRWFYCDMVTLPLHGKETWKQFFIYRTWQEHAK 80  
WD40-rpts                                                                                      

Query       81 SRAKPEDFTYKEIPVKFEFWAHPCYISRHGLTRNGQGKSAICMVTSVNRISTWDIHEGAMTWVSPVQPSYIMQMTTLPEM 160 
WD40-rpts                   (__________________WD 1_________________)   (_________________WD 2_

Query      161 HIAVTVDMQSTIKLWDCHNREVLATKALSFSCQLLQAEFTKDGPIVLVGDVCGNLYIFRIPDLYLISKVNVFPYSIDELY 240 
WD40-rpts      _______________)   (_________________WD 3_________________)   (_________________

Query      241 CSPQKKWVFLMGKRLHDLIKVFYMSSLLRPSEFSAPVSTVLEVPLIRKVFWTPRREDRITLISTVSPQNNTKFDTFDMKL 320 
WD40-rpts      WD 4________________)                      (_________________WD 5_______________

Query      321 EGIGNKVTIQEYLTASFSLAEREGKPDYFGVSDKDVIVCSTGSSLLLFDINGLRLQTFQYCPEEIWKLWVDPVHVIVTCN 400 
WD40-rpts      _)   (___________________WD 6___________________)  (_________________WD 7_______

Query      401 DGSLDVYAWEERSLLLRKCYRLLNRRYQPPSAFIIETLCDDVSIILVMTNSPNPCCLIAYTLNVCS 466 
WD40-rpts      _________)                                                        

7 WD40-repeats found in QUERY=ENSMUSP00000079460 (Len=466):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    94-134      4.72  309.63  0.00418       10.0%     33.65
  WD 2:  Seg  8   138-176      8.32  458.42  4.1e-05       22.5%     55.83
  WD 3:  Seg 12   180-219      6.97  402.68  0.00023       20.0%     56.20
  WD 4:  Seg 16   223-261      6.99  403.44  0.00023        7.5%     53.48
  WD 5:  Seg 22   284-322      4.35  294.20  0.00673        5.0%     36.32
  WD 6:  Seg 26   326-369      5.37  336.55  0.00181       12.5%     31.41
  WD 7:  Seg 30   372-410      7.02  404.60  0.00022       12.5%     37.64

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   94-134    PVKFEFWAHP-CYISRHGLTRNGQG-----KSAICMVTSVNRISTWD
   WD 2  138-176    -GAM-TWVSP-VQPSYIMQMTTLPE-----MHIAVTVDMQSTIKLWD
   WD 3  180-219    -REV-LATKALSFSCQLLQAEFTKD-----GPIVLVGDVCGNLYIFR
   WD 4  223-261    -LYL-ISKVN-VFPYSIDELYCSPQ-----KKWVFLMGKRLHDLIKV
   WD 5  284-322    -PLI-RKVFW-TPRREDRITLISTV-----SPQNNTKFDTFDMKLEG
   WD 6  326-369    -KVT-IQEYL-TASFSLAEREGKPDYFGVSDKDVIVCSTGSSLLLFD
   WD 7  372-410    -GLR-LQTFQ-YCPEEIWKLWVDPV-----HVIVTCNDGSLDVYAWE

   WD40 Template    TGEC-LRTLS-GHTSGVTSVSFSPD-----GKRLVSGSEDGTIKVWD