Input parameters:

  Query = ENSMUSP00000077289 (Len=514)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000077289, Len=514):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADYLISGGTGYVPEDGLTAQQLFANADGLTYNDFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPMDTVTEADMAI 80  
WD40-rpts                                                                                      

Query       81 AMALMGGIGFIHHNCTPEFQANEVRKVKKFEQGFITDPVVLSPSHTVGDVLEAKIQHGFSGIPITATGTMGSKLVGIVTS 160 
WD40-rpts                                                                                      

Query      161 RDIDFLAEKDHTTLLSEVMTPRVELVVAPAGVTLKEANEILQRSKKGKLPIVNDQDELVAIIARTDLKKNRDYPLASKDS 240 
WD40-rpts                                                                                      

Query      241 HKQLLCGAAVGTREDDKYRLDLLTQAGADVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDG 320 
WD40-rpts                                                                                      

Query      321 LRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPVIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEY 400 
WD40-rpts                                                                                      

Query      401 FFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGAQSLSVLR 480 
WD40-rpts         (_____________________WD 1_____________________)                             

Query      481 SMMYSGELKFEKRTMSAQIEGGVHGLHSYEKRLY 514 
WD40-rpts                                        

1 WD40-repeats found in QUERY=ENSMUSP00000077289 (Len=514):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 16   404-451      2.78  229.69  0.04884       22.5%     10.30

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  404-451    DGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKG

   WD40 Template    TGECLRTLSGHTS--------GVTSVSFSPDGKRLVSGSEDGTIKVWD