Input parameters:

  Query = ENSMUSP00000075918 (Len=466)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000075918, Len=466):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEIHLPSLPMMKILSYLDAYSLLQAAKVNKNWNELASSDVLWRKLCQKRWLYCDRVTLQLHGLETWKQFFISRTWQEHAK 80  
WD40-rpts                                                                                      

Query       81 TRAKPEDFNYKEIPVAFEFRAHPCYISRHGLIRNGQGKSAVCMVTSTNRISTWDVHEGAMTWVSPVQPSYITRMTTLPEM 160 
WD40-rpts                  (__________________WD 1__________________)   (_________________WD 2_

Query      161 HIAVTIDMQSNIKLWDCHNRKVLATTGLLSSCQLLQAVFTNDSPIVLVGDILGNLYIFRIPDLHLISKVNVFPYGIDELH 240 
WD40-rpts      _______________)   (_________________WD 3_________________)   (_________________

Query      241 CSPQKKWVLLIGKQRHVLTKVFYMSSLLRTSEFSAPVSTDLKFSLCQRAFWTPRREDRITLMSSTIPPDPTKFATFDMKL 320 
WD40-rpts      WD 4________________)   (_________________WD 5________________)                 

Query      321 EEIENKVTIQGHLVASFSLQDCKERAEWMGVSDKDVIVCSTGSSLLLFDINGLRLQTFQYCPEEILRLCVDPVHVIVTCN 400 
WD40-rpts                (_________________WD 6________________)  (_________________WD 7_______

Query      401 NGSLDVYVWEERSPLLRRCYRLRKRGYLPLSGFIIKTLCDESSIILVMTSSPIPCFLMAYTLKVCS 466 
WD40-rpts      _________)                                                        

7 WD40-repeats found in QUERY=ENSMUSP00000075918 (Len=466):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    93-134      4.28  291.25  0.00738       12.5%     37.42
  WD 2:  Seg  5   138-176      8.26  456.04  4.4e-05       22.5%     54.41
  WD 3:  Seg  9   180-219      6.49  382.66  0.00043       17.5%     56.52
  WD 4:  Seg 13   223-261      7.30  416.13  0.00015       10.0%     53.02
  WD 5:  Seg 16   265-303      2.97  237.26  0.03881       17.5%     27.12
  WD 6:  Seg 22   331-369      6.35  376.80  0.00052       12.5%     38.78
  WD 7:  Seg 26   372-410      6.44  380.52  0.00046       15.0%     37.82

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   93-134    IPVAFEFRAHPC-YISRHGLIRNGQGKSAVCMVTSTNRISTWD
   WD 2  138-176    GAMTWVSPVQPS-YITRMTTLPEMH---IAVTIDMQSNIKLWD
   WD 3  180-219    RKVLATTGLLSSCQLLQAVFTNDSP---IVLVGDILGNLYIFR
   WD 4  223-261    LHLISKVNVFPY-GIDELHCSPQKK---WVLLIGKQRHVLTKV
   WD 5  265-303    SSLLRTSEFSAP-VSTDLKFSLCQR---AFWTPRREDRITLMS
   WD 6  331-369    GHLVASFSLQDC-KERAEWMGVSDK---DVIVCSTGSSLLLFD
   WD 7  372-410    GLRLQTFQYCPE-EILRLCVDPVHV---IVTCNNGSLDVYVWE

   WD40 Template    GECLRTLSGHTS-GVTSVSFSPDGK---RLVSGSEDGTIKVWD