Input parameters:

  Query = ENSMUSP00000075721 (Len=563)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000075721, Len=563):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEPDSVIEDKTIELMCSVPRSLWLGCANLVESMCALSCLQSMPSVRCLQNTSVMEDQNEDESPKKSALWQISNGTSSVIV 80  
WD40-rpts                                                                                      

Query       81 SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYL 160 
WD40-rpts                                                                                      

Query      161 DARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETI 240 
WD40-rpts                                                                                      

Query      241 ESNWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSD 320 
WD40-rpts        (____________________WD 1___________________)   (________________WD 2_________

Query      321 STVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSA 400 
WD40-rpts      ______)   (________________WD 3_______________)(___________________WD 4_________

Query      401 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG 480 
WD40-rpts      _________)   (________________WD 5_______________)   (________________WD 6______

Query      481 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAQNETRSPSRTYTY 560 
WD40-rpts      _________)            (________________WD 7_______________)                     

Query      561 ISR 563 
WD40-rpts         

7 WD40-repeats found in QUERY=ENSMUSP00000075721 (Len=563):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   243-287      6.49  382.76  0.00043       30.0%     48.38
  WD 2:  Seg  6   291-327      8.91  482.69  1.9e-05       42.5%     48.76
  WD 3:  Seg 10   331-367      8.00  445.23  6.2e-05       40.0%     50.75
  WD 4:  Seg 14   368-410      7.68  431.96  9.4e-05       45.0%     44.94
  WD 5:  Seg 17   414-450      8.54  467.43  3.1e-05       40.0%     50.83
  WD 6:  Seg 21   454-490      9.03  487.54  1.7e-05       55.0%     53.13
  WD 7:  Seg 24   503-539      6.82  396.44  0.00028       40.0%     47.46

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  243-287    NWR-----CGRHNLQRIQCRSENSKGVYCLQY--DDDKIISGLRDNSIKIWD
   WD 2  291-327    -LE-----C-------LKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD
   WD 3  331-367    -GE-----V-------LNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWD
   WD 4  368-410    MASATDITL-------RRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWS
   WD 5  414-450    -CE-----F-------VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD
   WD 6  454-490    -GA-----C-------LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD
   WD 7  503-539    -TL-----C-------LRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD

   WD40 Template    TGE-----C-------LRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD