Input parameters:

  Query = ENSMUSP00000074500 (Len=243)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000074500, Len=243):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADRKLVVVFGATGAQGGSVARALLEDGTFRIRVVTRNPEQRAAKELKQQGAEVVRGDQDDAASMELALAGAHATFIVTN 80  
WD40-rpts      (_____________________________________WD 1_____________________________________)

Query       81 YWETCSQDREVQQGKLLADLAKRLGLHYVVYSGLENIRKLTAGKLAAGHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLL 160 
WD40-rpts                                                                                      

Query      161 SYFLPQKAADGKSFLLDLPMGDVPMDGMSVSDLGPVVLSLLKKPEEYVGQNIGLSTCRHTAEEYAALLSKHTGKAVHHAK 240 
WD40-rpts                                                                                      

Query      241 PVH 243 
WD40-rpts         

1 WD40-repeats found in QUERY=ENSMUSP00000074500 (Len=243):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-80       3.17  245.76  0.02994       22.5%     38.53

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-80     MADRKLVVVFGATGAQGGSVARALLEDGTFRIRVVTRNPEQRAAKELKQQGAEVVRGDQDDAASMELALAGAHATFIVTN

   WD40 Template    TGECLRTLSGHTSG-----------------VTSVSFSPD----------GKRLVSGSEDG-------------TIKVWD