Input parameters:

  Query = ENSMUSP00000073861 (Len=483)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000073861, Len=483):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MWYTSTRGMAPRVNFEGALFSGYAPDGGLYMPEELPRLDEETLRHWSTLSYRSLVKELCALFIGLELIPRHDLNDLIDRA 80  
WD40-rpts                                                                                      

Query       81 FSRFRHRNVVHLCKLKNGLNILELWHGVTYAFKDLSLSCTAQFLQYFLEKKKKHVTIVVGTSGDTGSAAIESVQGSKNVD 160 
WD40-rpts                                                        (_____________________________

Query      161 IIVLLPKGHCSKIQELQMTTVLKENVHVFEVEGNSDELDEPIKAVFADVAFVQRHNVMSLNSINWSRVLVQMAHHFFAYF 240 
WD40-rpts      _________________________WD 1___________________________________________________

Query      241 QCTPSLDTHPLPTVEVVVPTGAGGNLAAGCIAQKMGLPICLVVAVNRNDIIHRTVQKGDFSLCEVLRTTLASAMDIQVPY 320 
WD40-rpts      ___)                                                                            

Query      321 NMERIFWLLSGSDSQTTRALMEQFERTQSLQLPKDLHNKLSEAVTSESVTDEAITQTMARCWEENQYLLCPHSATAVNYH 400 
WD40-rpts                                                                                      

Query      401 YQQTDSGQSSIRCCLASASAVKFPEAVQAAGLTPETPAEILALEHKETRCIPMRRGDDWTQMLRVTIEGLSQRWKDCVVN 480 
WD40-rpts                                                                                      

Query      481 PSE 483 
WD40-rpts         

1 WD40-repeats found in QUERY=ENSMUSP00000073861 (Len=483):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   131-244      2.96  237.06  0.03905       20.0%     20.39

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  131-244    KKKHVTIVVGTSGDTGSAAIESVQGSKNVDIIVLLPKGHCSKIQELQMTTVLKENVHVFEVEGNSDELDEPIKAVFADVAFVQRHNVMSLNSINWSRVLVQMAHHFFAYFQCTP

   WD40 Template    TGECLRTLSGHTSG--------------VTSVSFSPDGKRL-------------------VSGS------------ED------------GTIK-----------------VWD