Input parameters:

  Query = ENSMUSP00000072554 (Len=195)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000072554, Len=195):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MATESGSDSQLRRRRRRDPEGSEKTELSEREPALAVAGSEENDDENEERWVGPLPVEATLAKKRKVLEFERVYLDNLPSA 80  
WD40-rpts                                                                                     (

Query       81 SMYERSYMHRDVITHVVCTKTDFIITASHDGHVKFWKKIEEGIEFVKHFRSHLGVIESIAVSSEGALFCSVGDDKAMKVF 160 
WD40-rpts      ________________WD 1________________)     (_________________WD 2________________

Query      161 DVVNFDMINMLKLGYFPGQCEWILPRRCHIFSCCF 195 
WD40-rpts      )                                  

2 WD40-repeats found in QUERY=ENSMUSP00000072554 (Len=195):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    80-117      5.78  353.57  0.00107       20.0%     45.26
  WD 2:  Seg  4   123-161      8.65  471.90  2.7e-05       25.0%     54.63

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   80-117    ASMYERSYMHRDVITHVVCTKT-DFIITASHDGHVKFWK
   WD 2  123-161    IEFVKHFRSHLGVIESIAVSSEGALFCSVGDDKAMKVFD

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD