Input parameters:

  Query = ENSMUSP00000072064 (Len=405)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000072064, Len=405):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAPSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGS 80  
WD40-rpts             (_________________WD 1_________________)   (_________________WD 2________

Query       81 RDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLI 160 
WD40-rpts      ________)   (_________________WD 3________________)   (_________________WD 4____

Query      161 VSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPS 240 
WD40-rpts      ____________)   (_________________WD 5________________)   (_________________WD 6

Query      241 GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGDMKARRPPPLTS 320 
WD40-rpts      ________________)   (_________________WD 7________________)      (______________

Query      321 SSGTLPKMDLPVPPGRDRSLESVQGEPQESISMPQTLTSTLEHIVGQLDILTQTVSILEQRLTLTEDRLKQCLENQQLIM 400 
WD40-rpts      ___WD 8________________)   (________________________WD 9_______________________)

Query      401 QRTPP 405 
WD40-rpts           

9 WD40-repeats found in QUERY=ENSMUSP00000072064 (Len=405):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     8-47       9.82  520.24  6.1e-06       40.0%     54.59
  WD 2:  Seg  5    51-89      10.13  533.05  4.1e-06       40.0%     55.89
  WD 3:  Seg  9    93-131      9.94  525.40  5.2e-06       40.0%     55.22
  WD 4:  Seg 13   135-173     10.52  549.37  2.4e-06       42.5%     56.68
  WD 5:  Seg 17   177-215     10.11  532.38  4.2e-06       37.5%     53.77
  WD 6:  Seg 21   219-257      9.86  521.78  5.8e-06       32.5%     56.79
  WD 7:  Seg 25   261-299     10.10  531.71  4.2e-06       40.0%     55.66
  WD 8:  Seg 29   306-344      6.14  368.33  0.00068       10.0%     35.65
  WD 9:  Seg 32   348-400      5.06  323.56  0.00271       10.0%     32.78

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    8-47     DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWH---------------
   WD 2   51-89     -QSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV---------------
   WD 3   93-131    -KGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWS---------------
   WD 4  135-173    -QRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD---------------
   WD 5  177-215    -RECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD---------------
   WD 6  219-257    -HRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD---------------
   WD 7  261-299    -GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK---------------
   WD 8  306-344    -DYGDMKARRPPPLTSSSGTLPKMDLPVPPGRDRSLESVQ---------------
   WD 9  348-400    -QESISMPQTLTSTLEHIVGQLDILTQTVSILEQRLTLT-EDRLKQCLENQQLIM

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD---------------