Input parameters:

  Query = ENSMUSP00000071811 (Len=466)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000071811, Len=466):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQTHLPSLPMMEIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWYYCDMDTLQLHGKETWKQFFVYRTWQEHAK 80  
WD40-rpts                                                                                      

Query       81 TRAKPEDFTYKEIPVEFEFRAYAYYISKHGLKRNGQGKSAVCMVTSMNRISTWDIHEGTMTWVSPVQEFYIELMTTLPEM 160 
WD40-rpts              (____________________WD 1____________________)   (_________________WD 2_

Query      161 HIVVTVDIRSTIKLWDCHNSEALATKRMVSSCQLLKAVITKDGPIVLIGDILGNLYIFRIPDLHLISEVNVFPFAIDELH 240 
WD40-rpts      _______________)   (_________________WD 3_________________)   (_________________

Query      241 CSPQKKWVFLIMKHPHVLTKVFYMSSLLRPTEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRNVPPSHTKFGIFDMKL 320 
WD40-rpts      WD 4________________)   (_________________WD 5________________)                 

Query      321 EEIGNKVTIQGYLTASFSLAEHEGRPECFGVSDKDVFVCSTGSSLLLFDINGLCLQSFQYCPEMITRLCVDPVHVIITCN 400 
WD40-rpts                (_________________WD 6________________)  (_________________WD 7_______

Query      401 NGSLDVYAWEERSPLLRKCYRLQNRRYLPPSSFINKALCDDVSIIGVMTNSPAPCYLMAYTLNICS 466 
WD40-rpts      _________)                                                        

7 WD40-repeats found in QUERY=ENSMUSP00000071811 (Len=466):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    89-134      4.38  295.47  0.00647       15.0%     33.06
  WD 2:  Seg  6   138-176      8.02  445.87  6.1e-05       20.0%     52.79
  WD 3:  Seg 10   180-219      6.59  386.82  0.00038       20.0%     53.03
  WD 4:  Seg 14   223-261      7.01  404.33  0.00022        7.5%     52.49
  WD 5:  Seg 18   265-303      3.40  255.20  0.02242       15.0%     24.02
  WD 6:  Seg 22   331-369      5.74  351.94  0.00112       15.0%     33.64
  WD 7:  Seg 26   372-410      6.46  381.48  0.00045       15.0%     37.15

Multiple sequence alignment of 7 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   89-134    TYKEIPVEFEFRAYAYYIS-KHGLKRNGQGKSAVCMVTSMNRISTWD
   WD 2  138-176    -GTMT------WVSPVQEF-YIELMTTLPEMHIVVTVDIRSTIKLWD
   WD 3  180-219    -SEAL------ATKRMVSSCQLLKAVITKDGPIVLIGDILGNLYIFR
   WD 4  223-261    -LHLI------SEVNVFPF-AIDELHCSPQKKWVFLIMKHPHVLTKV
   WD 5  265-303    -SSLL------RPTEFSDP-VSTVLEFSLCKRAFWTPRREDRITLMS
   WD 6  331-369    -GYLT------ASFSLAEH-EGRPECFGVSDKDVFVCSTGSSLLLFD
   WD 7  372-410    -GLCL------QSFQYCPE-MITRLCVDPVHVIITCNNGSLDVYAWE

   WD40 Template    TGECL------RTLSGHTS-GVTSVSFSPDGKRLVSGSEDGTIKVWD