Input parameters:

  Query = ENSMUSP00000071227 (Len=173)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSMUSP00000071227, Len=173):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGKAKKMVQSFSGFVKDTSDTEEHALPSAQALAAQSTRCSKSETLCLGKEQNHCSEEGWIADWDLYSFCVFESVDYLRSH 80  
WD40-rpts                  (_______________________WD 1_______________________)                

Query       81 LRLNSAKKKGTEIFQSVSQREPQVSPGVVDMDNDKDTEEPDQPSPSLLREKRLDLVTCDGGDCTDQDPAPDSPRSLGCWA 160 
WD40-rpts                                                                                      

Query      161 WLQRAFGQKKKKK 173 
WD40-rpts                   

1 WD40-repeats found in QUERY=ENSMUSP00000071227 (Len=173):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    13-64       2.98  237.65  0.03836       27.5%      2.10

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   13-64     GFVKDTSDTEEHALPSAQALAAQSTRCSKSETLCLGKEQNHCSEEGWIADWD

   WD40 Template    GECLRTLS----GHTS---------GVTSVSFSPDGKRLVSGSEDGTIKVWD